OT and monocultures: Gene Expression
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The CRC-TME interaction atlas: Home
Comparison of OTs to cultured cells
Gene Expression
Differential Expression
Enriched Pathways
PopulationClustering
PDOs co-cultured with TME cells
Gene Expression
Differential Expression
Enriched Pathways
Analysis of CAF secretomes
Proteomics exploration
Comparison proteomics/transcriptomics
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Cells to use:
OT vs Monocultures
Original tumors
Monocultures
Type of plot:
Gene expression
Metadata
Metadata to plot:
nCount_RNA
nFeature_RNA
patient
celltype
type
CMS
culture
medium
oxygen
matrix
metastasis
percent_mito
Gene(s) to plot:
Categories to use:
patient
celltype
type
CMS
culture
medium
oxygen
matrix
metastasis
Violin plot
Plot higher values on top
Label
Show axis
Show legend
Point size
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